Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AJ011932.1-201ENST00000621707 465 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC007431.3-201ENST00000623221 587 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC005089.1-201ENST00000619486 2241 ntBASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC40Q9H9A6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC027796.2-201ENST00000575326 344 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 BX539320.1-201ENST00000623759 877 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AL391825.1-201ENST00000457671 1364 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC005912.2-201ENST00000619492 2400 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC026748.1-201ENST00000624349 3251 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 AC018442.1-201ENST00000421439 2061 ntBASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC40Q9H9A6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 C1QBPP1-201ENST00000400117 770 ntBASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 SERBP1P5-201ENST00000510079 1181 ntBASIC15.43■□□□□ 0.06
LRRC40Q9H9A6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms