Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC140878.1-201ENST00000565277 250 ntBASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 MIR4453-201ENST00000584019 89 ntBASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 AC011474.4-201ENST00000623523 2076 ntBASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
AMBRA1Q9C0C7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MYO15B-237ENST00000642007 4893 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC107890.1-201ENST00000422478 521 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 BCRP1-201ENST00000444246 691 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC125807.1-201ENST00000483097 614 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC025181.2-201ENST00000606994 802 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 AC126755.1-201ENST00000525846 6405 ntBASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
AMBRA1Q9C0C7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms