Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 HIST3H2BA-201ENST00000436555 524 ntBASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 ATP5G2P4-201ENST00000442175 420 ntBASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 MYCLP2-201ENST00000449268 967 ntBASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 TIMM17BP1-201ENST00000545713 516 ntBASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 AC123567.1-201ENST00000548294 1261 ntBASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAF4Q9BUZ4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 ARSEP1-201ENST00000420443 635 ntBASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC132938.2-201ENST00000579188 680 ntBASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AC093726.1-201ENST00000608064 963 ntBASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AL591163.1-201ENST00000641757 987 ntBASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAF4Q9BUZ4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 AC099521.3-201ENST00000624251 2938 ntBASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAF4Q9BUZ4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms