Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC105250.1-201ENST00000509378 2057 ntBASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
PCGF1Q9BSM1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AC134915.1-201ENST00000426461 574 ntBASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AL391069.4-201ENST00000609583 481 ntBASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 CU634019.7-201ENST00000624153 1185 ntBASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 FP236241.2-201ENST00000624906 1185 ntBASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 AC079781.5-202ENST00000641784 3743 ntBASIC12.83□□□□□ -0.36
PCGF1Q9BSM1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC007686.3-201ENST00000619017 3487 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 KRT8P22-201ENST00000562317 1415 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC015656.1-201ENST00000624209 3578 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AL442647.2-201ENST00000429864 857 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AL162726.2-201ENST00000438986 1017 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC007389.4-201ENST00000454674 793 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 VDAC1P7-201ENST00000462417 847 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.82□□□□□ -0.36
PCGF1Q9BSM1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms