Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 TSSK5P-201ENST00000423978 907 ntBASIC15.71■□□□□ 0.11
C9orf72Q96LT7 KRT18P64-201ENST00000434946 1219 ntBASIC15.71■□□□□ 0.11
C9orf72Q96LT7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC015910.1-201ENST00000579400 975 ntBASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
C9orf72Q96LT7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C9orf72Q96LT7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.71■□□□□ 0.1
C9orf72Q96LT7 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.1
C9orf72Q96LT7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
C9orf72Q96LT7 AC018442.1-201ENST00000421439 2061 ntBASIC15.71■□□□□ 0.1
C9orf72Q96LT7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 CETN4P-206ENST00000642099 2168 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 LINC02560-201ENST00000596379 459 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AL589739.1-201ENST00000607720 493 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AC008761.3-201ENST00000624803 892 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 KRT8P12-202ENST00000472924 1397 ntBASIC15.7■□□□□ 0.1
C9orf72Q96LT7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C9orf72Q96LT7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C9orf72Q96LT7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms