Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 DOC2GP-202ENST00000514950 1163 ntBASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 RARRES2P5-201ENST00000564013 466 ntBASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAF3IP1Q8TDR0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 PMS2P2-201ENST00000425039 1128 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 AC092183.1-201ENST00000469884 875 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 FAM86LP-201ENST00000478302 853 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 RFPL4AP1-201ENST00000530883 850 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAF3IP1Q8TDR0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 AC005498.2-205ENST00000593218 784 ntBASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAF3IP1Q8TDR0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms