Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 MESTP3-201ENST00000503460 968 ntBASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 MIR6805-201ENST00000615055 62 ntBASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AC023090.2-201ENST00000625182 2110 ntBASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AC006453.4-201ENST00000636949 1252 ntBASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAM1L1Q8N609 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 CLUHP2-201ENST00000426660 1303 ntBASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 FTLP10-202ENST00000505798 471 ntBASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC133552.6-201ENST00000613406 534 ntBASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC138466.3-201ENST00000619983 221 ntBASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAM1L1Q8N609 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAM1L1Q8N609 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAM1L1Q8N609 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms