Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 MST1P2-201ENST00000457982 2291 ntBASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AL354702.1-201ENST00000442006 1960 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AL035456.1-201ENST00000456064 1369 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AC005237.2-201ENST00000434368 219 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 MTND6P24-201ENST00000440466 518 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AL079307.3-201ENST00000556114 283 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AC025048.3-201ENST00000590609 569 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AC022145.2-201ENST00000598203 171 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AC005702.4-201ENST00000618393 416 ntBASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRTM1Q86UE6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AL360270.3-201ENST00000609118 1348 ntBASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRTM1Q86UE6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms