Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
KRT28Q7Z3Y7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AC114947.1-202ENST00000514136 344 ntBASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AL022344.2-201ENST00000568976 968 ntBASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AC138466.4-201ENST00000623965 852 ntBASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
KRT28Q7Z3Y7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 BAK1P1-201ENST00000317045 636 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AL357563.1-201ENST00000404728 395 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC026410.1-201ENST00000507366 1101 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 MIR5196-201ENST00000578146 115 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 AC023090.2-201ENST00000625182 2110 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 LINC00431-202ENST00000636375 159 ntBASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
KRT28Q7Z3Y7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC004837.1-201ENST00000446267 564 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AP000911.2-201ENST00000534330 502 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC131206.1-201ENST00000538078 1211 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC027237.1-201ENST00000560942 655 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 NUDT4P2-201ENST00000578341 546 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC005041.3-201ENST00000606287 649 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 FO393412.1-201ENST00000619841 382 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 AC013726.1-201ENST00000563747 2285 ntBASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
KRT28Q7Z3Y7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms