Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NHLRC1Q6VVB1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC002472.2-201ENST00000442739 958 ntBASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC055876.2-201ENST00000531834 546 ntBASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC008761.3-201ENST00000624803 892 ntBASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 PRSS30P-206ENST00000641773 873 ntBASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 OR2I1P-210ENST00000642037 4691 ntBASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NHLRC1Q6VVB1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL138799.1-201ENST00000448213 1675 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL360270.3-201ENST00000609118 1348 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 VDAC1P7-201ENST00000462417 847 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AC092552.1-201ENST00000547243 906 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AL049840.4-201ENST00000602422 811 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TMEM261P1-201ENST00000604899 340 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AC107373.2-201ENST00000607735 490 ntBASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NHLRC1Q6VVB1 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms