Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AL359881.3-201ENST00000602640 1721 ntBASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AC131009.4-201ENST00000624048 1740 ntBASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AC084121.4-201ENST00000641598 221 ntBASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AF228730.8-201ENST00000642140 221 ntBASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 AC100757.3-201ENST00000622361 1406 ntBASIC15.94■□□□□ 0.14
FOXR1Q6PIV2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 AC091167.2-201ENST00000579581 588 ntBASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 AL358472.5-202ENST00000641448 1267 ntBASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
FOXR1Q6PIV2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FOXR1Q6PIV2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms