Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK1P53667 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK1P53667 HIST2H2BB-201ENST00000449108 381 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK1P53667 AC100850.1-201ENST00000506768 649 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK1P53667 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK1P53667 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 AP001065.2-201ENST00000617205 644 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 AL157791.1-201ENST00000553667 1699 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 AC148477.4-201ENST00000613430 1793 ntBASIC14.95□□□□□ -0.02
LIMK1P53667 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LIMK1P53667 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK1P53667 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK1P53667 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK1P53667 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK1P53667 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.94□□□□□ -0.02
LIMK1P53667 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.94□□□□□ -0.02
LIMK1P53667 AC005357.2-202ENST00000590507 1060 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 AC132192.2-201ENST00000596206 1147 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 AC012044.1-201ENST00000603431 297 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 AL136295.7-201ENST00000619226 1200 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 AC006486.2-201ENST00000624246 2199 ntBASIC14.94□□□□□ -0.02
LIMK1P53667 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK1P53667 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LIMK1P53667 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK1P53667 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.93□□□□□ -0.02
LIMK1P53667 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LIMK1P53667 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LIMK1P53667 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms