Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 BRD4-203ENST00000371835 4624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
PCP4P48539 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 AC026746.1-201ENST00000505623 2105 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 MIR3960-201ENST00000583311 91 ntBASIC9.99□□□□□ -0.81
PCP4P48539 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 SPATA33-201ENST00000301031 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 SEMA4A-201ENST00000355014 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 LINC01572-206ENST00000624829 1666 ntTSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 ACTC1-201ENST00000290378 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 MPP3-202ENST00000398393 2996 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.99□□□□□ -0.81
PCP4P48539 DPY19L2P2-204ENST00000438364 3947 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 PSPN-202ENST00000597721 3911 ntBASIC9.99□□□□□ -0.81
PCP4P48539 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
PCP4P48539 KRT8P20-201ENST00000423953 1409 ntBASIC9.99□□□□□ -0.81
PCP4P48539 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC9.99□□□□□ -0.81
PCP4P48539 LINC02486-201ENST00000604157 3000 ntBASIC9.99□□□□□ -0.81
PCP4P48539 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
PCP4P48539 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 INE2-201ENST00000630399 1874 ntBASIC9.98□□□□□ -0.81
PCP4P48539 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 FAM124B-202ENST00000389874 2594 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 PCDHGA10-202ENST00000612503 4462 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
PCP4P48539 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.98□□□□□ -0.81
PCP4P48539 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC9.98□□□□□ -0.81
PCP4P48539 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
PCP4P48539 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 URM1-204ENST00000452446 2944 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC9.98□□□□□ -0.81
PCP4P48539 STAM-AS1-201ENST00000563601 2595 ntBASIC9.98□□□□□ -0.81
PCP4P48539 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
PCP4P48539 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms