Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL1P22362 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CCL1P22362 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL1P22362 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.05□□□□□ -0.32
CCL1P22362 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL1P22362 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.05□□□□□ -0.32
CCL1P22362 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL1P22362 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CCL1P22362 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CCL1P22362 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL1P22362 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL1P22362 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCL1P22362 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.04□□□□□ -0.32
CCL1P22362 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL1P22362 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL1P22362 AL512638.1-201ENST00000457493 794 ntBASIC13.04□□□□□ -0.32
CCL1P22362 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL1P22362 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.04□□□□□ -0.32
CCL1P22362 AC093004.1-201ENST00000508850 424 ntBASIC13.04□□□□□ -0.32
CCL1P22362 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.04□□□□□ -0.32
CCL1P22362 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 AC139749.1-202ENST00000617529 3139 ntBASIC13.04□□□□□ -0.32
CCL1P22362 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CCL1P22362 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL1P22362 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL1P22362 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL1P22362 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCL1P22362 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL1P22362 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL1P22362 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms