Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA1P02708 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CHRNA1P02708 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA1P02708 MBLAC2-202ENST00000514906 1936 ntBASIC16.35■□□□□ 0.21
CHRNA1P02708 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 C18orf15-201ENST00000623680 2534 ntBASIC16.35■□□□□ 0.21
CHRNA1P02708 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA1P02708 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CHRNA1P02708 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 AL596257.1-201ENST00000641463 2694 ntBASIC16.34■□□□□ 0.21
CHRNA1P02708 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 RN7SKP214-201ENST00000364208 315 ntBASIC16.34■□□□□ 0.21
CHRNA1P02708 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 FXNP2-201ENST00000411625 547 ntBASIC16.34■□□□□ 0.21
CHRNA1P02708 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CHRNA1P02708 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.34■□□□□ 0.21
CHRNA1P02708 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.34■□□□□ 0.21
CHRNA1P02708 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHRNA1P02708 Z98259.2-201ENST00000641583 609 ntBASIC16.34■□□□□ 0.21
CHRNA1P02708 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA1P02708 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA1P02708 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.33■□□□□ 0.21
CHRNA1P02708 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.33■□□□□ 0.21
CHRNA1P02708 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.33■□□□□ 0.21
CHRNA1P02708 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.33■□□□□ 0.21
CHRNA1P02708 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.33■□□□□ 0.21
CHRNA1P02708 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.33■□□□□ 0.21
CHRNA1P02708 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA1P02708 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA1P02708 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC009779.1-201ENST00000551138 283 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC103988.2-201ENST00000561804 725 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC008805.1-201ENST00000590892 364 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 AC128714.1-201ENST00000637035 887 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHRNA1P02708 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 AL008718.2-201ENST00000609206 1313 ntBASIC16.33■□□□□ 0.2
CHRNA1P02708 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA1P02708 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA1P02708 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA1P02708 FAM90A7P-201ENST00000382628 1395 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms