Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.63□□□□□ -0.23
ZIC3O60481 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.63□□□□□ -0.23
ZIC3O60481 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZIC3O60481 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZIC3O60481 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZIC3O60481 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.62□□□□□ -0.23
ZIC3O60481 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZIC3O60481 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.62□□□□□ -0.23
ZIC3O60481 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 AL583810.1-201ENST00000553344 1045 ntBASIC13.62□□□□□ -0.23
ZIC3O60481 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZIC3O60481 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZIC3O60481 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.62□□□□□ -0.23
ZIC3O60481 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC3O60481 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 AC011270.2-201ENST00000624293 2550 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 AL354989.2-201ENST00000435838 1540 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 AL391280.1-201ENST00000506969 1062 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.61□□□□□ -0.23
ZIC3O60481 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC3O60481 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.61□□□□□ -0.23
ZIC3O60481 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
ZIC3O60481 AC106820.3-201ENST00000561653 397 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 DUX4L45-201ENST00000566406 1057 ntBASIC13.61□□□□□ -0.23
ZIC3O60481 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ZIC3O60481 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.61□□□□□ -0.23
ZIC3O60481 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZIC3O60481 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.61□□□□□ -0.23
ZIC3O60481 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms