Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 NQO2-204ENST00000380454 851 ntTSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC25.22■■□□□ 1.63
CUX2O14529 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 LY6E-215ENST00000523847 427 ntTSL 3 BASIC25.22■■□□□ 1.63
CUX2O14529 F11R-204ENST00000537746 1245 ntTSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 NAT9-219ENST00000582524 573 ntTSL 4 BASIC25.22■■□□□ 1.63
CUX2O14529 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC25.22■■□□□ 1.63
CUX2O14529 AL022334.2-201ENST00000610000 484 ntBASIC25.22■■□□□ 1.63
CUX2O14529 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC25.22■■□□□ 1.63
CUX2O14529 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC25.22■■□□□ 1.63
CUX2O14529 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CUX2O14529 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 AL157823.1-201ENST00000403727 628 ntBASIC25.21■■□□□ 1.63
CUX2O14529 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 AC006529.1-201ENST00000459978 637 ntBASIC25.21■■□□□ 1.63
CUX2O14529 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 MIR4640-201ENST00000581824 90 ntBASIC25.21■■□□□ 1.63
CUX2O14529 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 AC112504.1-201ENST00000623415 1841 ntBASIC25.21■■□□□ 1.63
CUX2O14529 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 FTX-216ENST00000638985 1367 ntTSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 GEMIN8P4-201ENST00000380526 729 ntBASIC25.21■■□□□ 1.63
CUX2O14529 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CUX2O14529 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC25.21■■□□□ 1.63
CUX2O14529 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC25.21■■□□□ 1.63
CUX2O14529 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC25.21■■□□□ 1.63
CUX2O14529 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC25.21■■□□□ 1.63
CUX2O14529 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CUX2O14529 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CUX2O14529 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC25.2■■□□□ 1.63
CUX2O14529 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CUX2O14529 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC25.2■■□□□ 1.63
CUX2O14529 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC25.2■■□□□ 1.63
CUX2O14529 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CUX2O14529 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC25.2■■□□□ 1.63
CUX2O14529 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC25.2■■□□□ 1.63
CUX2O14529 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC25.2■■□□□ 1.62
CUX2O14529 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC25.2■■□□□ 1.62
CUX2O14529 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CUX2O14529 AC008536.3-201ENST00000623282 1599 ntBASIC25.2■■□□□ 1.62
CUX2O14529 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC25.2■■□□□ 1.62
CUX2O14529 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
CUX2O14529 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC25.2■■□□□ 1.62
CUX2O14529 HNRNPA1P25-201ENST00000422644 937 ntBASIC25.2■■□□□ 1.62
CUX2O14529 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC25.2■■□□□ 1.62
CUX2O14529 AC092896.1-201ENST00000465850 380 ntBASIC25.2■■□□□ 1.62
CUX2O14529 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC25.2■■□□□ 1.62
CUX2O14529 OR5BD1P-201ENST00000532527 817 ntBASIC25.2■■□□□ 1.62
CUX2O14529 NEK4P3-201ENST00000604859 544 ntBASIC25.2■■□□□ 1.62
CUX2O14529 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC25.2■■□□□ 1.62
CUX2O14529 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC25.2■■□□□ 1.62
CUX2O14529 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CUX2O14529 AC020910.5-201ENST00000623668 1865 ntBASIC25.19■■□□□ 1.62
CUX2O14529 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CUX2O14529 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC25.19■■□□□ 1.62
CUX2O14529 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CUX2O14529 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CUX2O14529 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC25.19■■□□□ 1.62
CUX2O14529 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC25.19■■□□□ 1.62
CUX2O14529 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
CUX2O14529 AC023968.2-201ENST00000560593 1049 ntBASIC25.19■■□□□ 1.62
CUX2O14529 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC25.19■■□□□ 1.62
CUX2O14529 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CUX2O14529 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC25.19■■□□□ 1.62
CUX2O14529 AC021321.1-201ENST00000607397 1113 ntBASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms