Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC069224.1-201ENST00000566372 1715 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AL157414.3-201ENST00000624276 1954 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AL357563.1-201ENST00000404728 395 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AL807761.2-201ENST00000422849 729 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC024293.1-201ENST00000467930 498 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC012158.2-201ENST00000536546 354 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC011247.3-201ENST00000603297 438 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC244250.3-201ENST00000620749 366 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 AC124067.4-201ENST00000519691 2379 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCH2Q9Y6C5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PTCH2Q9Y6C5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 FAM86KP-201ENST00000509817 987 ntBASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 NUDT4P2-201ENST00000578341 546 ntBASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AC008825.2-201ENST00000603374 718 ntBASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.89■□□□□ 0.29
PTCH2Q9Y6C5 LINC01165-201ENST00000445190 1623 ntBASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 RN7SKP230-201ENST00000365642 335 ntBASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTCH2Q9Y6C5 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms