Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 RHOXF1P1-202ENST00000635473 501 ntBASIC12□□□□□ -0.49
TSSC4Q9Y5U2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12□□□□□ -0.49
TSSC4Q9Y5U2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AL355994.2-201ENST00000447882 704 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 GAPDHP40-201ENST00000505218 1006 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 KRT90P-201ENST00000549264 1064 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AC023310.1-201ENST00000554836 735 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RN7SL219P-201ENST00000582872 296 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TUBB1P2-201ENST00000422712 1306 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 KRT8P35-201ENST00000483942 1338 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TUBB1P1-201ENST00000503144 1300 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 REXO1L6P-201ENST00000603433 1515 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 MSTO2P-201ENST00000314835 1709 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CYP2T1P-202ENST00000641596 2535 ntBASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
TSSC4Q9Y5U2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms