Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 MRPS18AP1-201ENST00000414458 589 ntBASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 TPRX2P-201ENST00000535362 881 ntBASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 ACE3P-201ENST00000423435 1973 ntBASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGA11Q9Y5H2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC015656.1-201ENST00000624209 3578 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC005840.4-201ENST00000541242 2494 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RN7SL399P-201ENST00000471648 279 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 FAM86LP-201ENST00000478302 853 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RRP7BP-205ENST00000566851 833 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC140479.7-201ENST00000636301 2332 ntBASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGA11Q9Y5H2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGA11Q9Y5H2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms