Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 SBF1P1-201ENST00000444527 5631 ntBASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SSX2IPQ9Y2D8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 GOLGA2P4-201ENST00000441462 777 ntBASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 MIR3615-201ENST00000581999 87 ntBASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 AL118558.3-201ENST00000607414 1079 ntBASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 PRSS30P-206ENST00000641773 873 ntBASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSX2IPQ9Y2D8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SSX2IPQ9Y2D8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MIR1202-201ENST00000408529 83 ntBASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 LRRC59-203ENST00000576448 1531 ntBASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 AC069224.1-201ENST00000566372 1715 ntBASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSX2IPQ9Y2D8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SSX2IPQ9Y2D8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms