Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF216Q9NWF9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF216Q9NWF9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF216Q9NWF9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF216Q9NWF9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AC026691.1-201ENST00000602502 2017 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AL359265.1-201ENST00000440296 795 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AC091860.1-201ENST00000505723 432 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 IGHV3-62-201ENST00000520057 340 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 ENY2-208ENST00000520147 857 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 VTA1P2-201ENST00000520205 911 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AC023825.1-201ENST00000566704 1030 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 NBR2-204ENST00000587322 63 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AL606834.3-201ENST00000602615 496 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 Metazoa_SRP.102-201ENST00000613350 315 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 AL590396.4-201ENST00000636779 956 ntBASIC18.42■□□□□ 0.54
RNF216Q9NWF9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF216Q9NWF9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 KRT18P32-201ENST00000424695 1287 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC073475.1-201ENST00000434012 592 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC245047.6-201ENST00000445444 617 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC079140.1-201ENST00000508039 487 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC109322.1-201ENST00000524499 1264 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC022239.2-201ENST00000533322 594 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 ADI1P3-201ENST00000549509 470 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 MTCO2P2-201ENST00000591258 225 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AL162274.1-201ENST00000617191 1098 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 OR7G15P-201ENST00000617262 333 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AP001350.2-201ENST00000625104 1094 ntBASIC18.41■□□□□ 0.54
RNF216Q9NWF9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF216Q9NWF9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms