Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 AC007541.1-201ENST00000570282 1469 ntBASIC15.72■□□□□ 0.11
PCDH9Q9HC56 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 DFFBP1-201ENST00000433250 979 ntBASIC15.72■□□□□ 0.11
PCDH9Q9HC56 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 TERF1P3-201ENST00000505638 1227 ntBASIC15.72■□□□□ 0.11
PCDH9Q9HC56 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH9Q9HC56 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.71■□□□□ 0.11
PCDH9Q9HC56 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 RRP7BP-205ENST00000566851 833 ntBASIC15.71■□□□□ 0.11
PCDH9Q9HC56 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.71■□□□□ 0.11
PCDH9Q9HC56 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.71■□□□□ 0.11
PCDH9Q9HC56 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH9Q9HC56 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH9Q9HC56 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH9Q9HC56 OR2I1P-209ENST00000641730 5365 ntBASIC15.71■□□□□ 0.1
PCDH9Q9HC56 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH9Q9HC56 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AC126755.1-201ENST00000525846 6405 ntBASIC15.7■□□□□ 0.1
PCDH9Q9HC56 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AL360270.3-201ENST00000609118 1348 ntBASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AC139749.1-202ENST00000617529 3139 ntBASIC15.7■□□□□ 0.1
PCDH9Q9HC56 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 RN7SL399P-201ENST00000471648 279 ntBASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 AC099568.2-201ENST00000609194 695 ntBASIC15.7■□□□□ 0.1
PCDH9Q9HC56 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH9Q9HC56 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms