Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KRT18P3-201ENST00000451602 1288 ntBASIC18.75■□□□□ 0.59
UPF2Q9HAU5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC18.75■□□□□ 0.59
UPF2Q9HAU5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 AC092135.3-201ENST00000624151 1846 ntBASIC18.74■□□□□ 0.59
UPF2Q9HAU5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 AL133267.1-201ENST00000398220 340 ntBASIC18.74■□□□□ 0.59
UPF2Q9HAU5 HIST3H2BA-201ENST00000436555 524 ntBASIC18.74■□□□□ 0.59
UPF2Q9HAU5 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.74■□□□□ 0.59
UPF2Q9HAU5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 AC015802.1-201ENST00000588104 1449 ntBASIC18.74■□□□□ 0.59
UPF2Q9HAU5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPF2Q9HAU5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AL592309.1-201ENST00000443127 649 ntBASIC18.73■□□□□ 0.59
UPF2Q9HAU5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AC027601.4-201ENST00000611259 610 ntBASIC18.73■□□□□ 0.59
UPF2Q9HAU5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
UPF2Q9HAU5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms