Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NKAIN1P1-201ENST00000435754 582 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AC005077.2-201ENST00000449786 690 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 IGHJ2P-201ENST00000454480 60 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AC020914.3-201ENST00000594712 304 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AC007663.3-201ENST00000609632 465 ntBASIC15.79■□□□□ 0.12
LRRC3Q9BY71 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC3Q9BY71 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 FKBP4P6-201ENST00000457486 1332 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SLC25A24P2-201ENST00000415059 510 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 AC016700.1-201ENST00000429424 312 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SERPINA13P-202ENST00000478994 924 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 AC044849.1-201ENST00000519737 1188 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 MIR4783-201ENST00000580343 82 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 AL021578.1-201ENST00000613646 709 ntBASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC3Q9BY71 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.77■□□□□ 0.12
LRRC3Q9BY71 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.77■□□□□ 0.12
LRRC3Q9BY71 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms