Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.86■□□□□ 0.13
SMOQ99835 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 REXO1L6P-201ENST00000603433 1515 ntBASIC15.86■□□□□ 0.13
SMOQ99835 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 RN7SKP230-201ENST00000365642 335 ntBASIC15.86■□□□□ 0.13
SMOQ99835 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.86■□□□□ 0.13
SMOQ99835 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.86■□□□□ 0.13
SMOQ99835 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.86■□□□□ 0.13
SMOQ99835 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.86■□□□□ 0.13
SMOQ99835 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.86■□□□□ 0.13
SMOQ99835 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 AC010328.2-201ENST00000597698 1111 ntBASIC15.86■□□□□ 0.13
SMOQ99835 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.86■□□□□ 0.13
SMOQ99835 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
SMOQ99835 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMOQ99835 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.85■□□□□ 0.13
SMOQ99835 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.85■□□□□ 0.13
SMOQ99835 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.85■□□□□ 0.13
SMOQ99835 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SMOQ99835 AC011840.2-201ENST00000563063 1520 ntBASIC15.85■□□□□ 0.13
SMOQ99835 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.85■□□□□ 0.13
SMOQ99835 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 AP006547.1-201ENST00000563435 692 ntBASIC15.85■□□□□ 0.13
SMOQ99835 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 MIR4741-201ENST00000579822 90 ntBASIC15.85■□□□□ 0.13
SMOQ99835 RN7SL713P-201ENST00000582127 302 ntBASIC15.85■□□□□ 0.13
SMOQ99835 AC138696.2-201ENST00000607376 223 ntBASIC15.85■□□□□ 0.13
SMOQ99835 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.85■□□□□ 0.13
SMOQ99835 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.85■□□□□ 0.13
SMOQ99835 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.85■□□□□ 0.13
SMOQ99835 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SMOQ99835 AL138725.1-201ENST00000407347 1314 ntBASIC15.85■□□□□ 0.13
SMOQ99835 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.85■□□□□ 0.13
SMOQ99835 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.85■□□□□ 0.13
SMOQ99835 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SMOQ99835 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SMOQ99835 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SMOQ99835 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SMOQ99835 AC020910.5-201ENST00000623668 1865 ntBASIC15.84■□□□□ 0.13
SMOQ99835 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.84■□□□□ 0.13
SMOQ99835 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SMOQ99835 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms