Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 CLUHP6-201ENST00000580789 941 ntBASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PDLIM5Q96HC4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 EIF3FP3-201ENST00000434851 1086 ntBASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AL162726.2-201ENST00000438986 1017 ntBASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AC026434.2-201ENST00000506094 1078 ntBASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDLIM5Q96HC4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDLIM5Q96HC4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms