Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTP4Q96DX8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.47■□□□□ 0.07
RTP4Q96DX8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RTP4Q96DX8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RTP4Q96DX8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTP4Q96DX8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RTP4Q96DX8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTP4Q96DX8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.47■□□□□ 0.07
RTP4Q96DX8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RTP4Q96DX8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AC134915.1-201ENST00000426461 574 ntBASIC15.46■□□□□ 0.07
RTP4Q96DX8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AC140912.1-201ENST00000577171 1054 ntBASIC15.46■□□□□ 0.07
RTP4Q96DX8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 AC093726.1-201ENST00000608064 963 ntBASIC15.46■□□□□ 0.07
RTP4Q96DX8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.46■□□□□ 0.07
RTP4Q96DX8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RTP4Q96DX8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RTP4Q96DX8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTP4Q96DX8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
RTP4Q96DX8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.46■□□□□ 0.06
RTP4Q96DX8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RTP4Q96DX8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.46■□□□□ 0.06
RTP4Q96DX8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 OR8S1-201ENST00000310194 1080 ntBASIC15.45■□□□□ 0.06
RTP4Q96DX8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 KRT17P7-201ENST00000451704 1104 ntBASIC15.45■□□□□ 0.06
RTP4Q96DX8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.45■□□□□ 0.06
RTP4Q96DX8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RTP4Q96DX8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.44■□□□□ 0.06
RTP4Q96DX8 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RTP4Q96DX8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
RTP4Q96DX8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms