Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AL390755.1-201ENST00000623716 2027 ntBASIC15.69■□□□□ 0.1
SCG3Q8WXD2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AC041040.2-201ENST00000622926 2899 ntBASIC15.69■□□□□ 0.1
SCG3Q8WXD2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 SBF1P1-201ENST00000444527 5631 ntBASIC15.69■□□□□ 0.1
SCG3Q8WXD2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCG3Q8WXD2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 OR8S1-201ENST00000310194 1080 ntBASIC15.68■□□□□ 0.1
SCG3Q8WXD2 DGCR5-201ENST00000399539 862 ntBASIC15.68■□□□□ 0.1
SCG3Q8WXD2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AC008494.3-201ENST00000606615 944 ntBASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AC007431.3-201ENST00000623221 587 ntBASIC15.68■□□□□ 0.1
SCG3Q8WXD2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCG3Q8WXD2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 KRT8P44-201ENST00000441609 1350 ntBASIC15.67■□□□□ 0.1
SCG3Q8WXD2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCG3Q8WXD2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms