Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 DFFBP1-201ENST00000433250 979 ntBASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AC008494.3-201ENST00000606615 944 ntBASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 REXO1L4P-201ENST00000605109 1937 ntBASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AL365209.1-201ENST00000624418 6473 ntBASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIMC1Q8NDZ2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
SIMC1Q8NDZ2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 GAPDHP21-201ENST00000450301 1010 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CTBP2P3-201ENST00000585629 1255 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 BRI3BPP1-201ENST00000594224 787 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 AC007431.3-201ENST00000623221 587 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 MROH4P-201ENST00000431302 1578 ntBASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.39□□□□□ -0.11
SIMC1Q8NDZ2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms