Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AL391825.1-201ENST00000457671 1364 ntBASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC087499.6-201ENST00000411576 835 ntBASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC098850.1-201ENST00000419919 790 ntBASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AL353779.1-201ENST00000434793 351 ntBASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC116Q8IYX3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AL365209.1-201ENST00000624418 6473 ntBASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AC093813.1-201ENST00000605066 256 ntBASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 LINC01101-201ENST00000622953 1884 ntBASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 INTS4P2-202ENST00000614726 2019 ntBASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC116Q8IYX3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms