Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.12■□□□□ 0.33
SHC4Q6S5L8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 CYMP-203ENST00000474680 1263 ntBASIC17.11■□□□□ 0.33
SHC4Q6S5L8 RPL13AP25-201ENST00000484130 612 ntBASIC17.11■□□□□ 0.33
SHC4Q6S5L8 AC093004.1-201ENST00000508850 424 ntBASIC17.11■□□□□ 0.33
SHC4Q6S5L8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 AC007431.3-201ENST00000623221 587 ntBASIC17.11■□□□□ 0.33
SHC4Q6S5L8 BX539320.1-201ENST00000623759 877 ntBASIC17.11■□□□□ 0.33
SHC4Q6S5L8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.11■□□□□ 0.33
SHC4Q6S5L8 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 RNU1-114P-201ENST00000365297 166 ntBASIC17.1■□□□□ 0.33
SHC4Q6S5L8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AC134915.1-201ENST00000426461 574 ntBASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AC055876.2-201ENST00000531834 546 ntBASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AL359711.2-201ENST00000563105 872 ntBASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 KRT8P22-201ENST00000562317 1415 ntBASIC17.1■□□□□ 0.33
SHC4Q6S5L8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SHC4Q6S5L8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.09■□□□□ 0.33
SHC4Q6S5L8 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms