Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.6□□□□□ -0.07
VSX2P58304 LRRC59-203ENST00000576448 1531 ntBASIC14.6□□□□□ -0.07
VSX2P58304 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VSX2P58304 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 KRT8P44-201ENST00000441609 1350 ntBASIC14.6□□□□□ -0.07
VSX2P58304 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
VSX2P58304 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VSX2P58304 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 AC092933.1-201ENST00000393644 945 ntBASIC14.59□□□□□ -0.07
VSX2P58304 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 AC104457.1-201ENST00000401024 814 ntBASIC14.59□□□□□ -0.07
VSX2P58304 AL139094.1-201ENST00000405549 1188 ntBASIC14.59□□□□□ -0.07
VSX2P58304 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 FTH1P14-201ENST00000482930 551 ntBASIC14.59□□□□□ -0.07
VSX2P58304 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.59□□□□□ -0.07
VSX2P58304 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 PRSS30P-206ENST00000641773 873 ntBASIC14.59□□□□□ -0.07
VSX2P58304 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
VSX2P58304 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.59□□□□□ -0.07
VSX2P58304 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
VSX2P58304 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VSX2P58304 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSX2P58304 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.58□□□□□ -0.07
VSX2P58304 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSX2P58304 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.58□□□□□ -0.07
VSX2P58304 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSX2P58304 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
VSX2P58304 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 REXO1L5P-201ENST00000622260 2098 ntBASIC14.58□□□□□ -0.08
VSX2P58304 AC126365.1-201ENST00000578585 1514 ntBASIC14.58□□□□□ -0.08
VSX2P58304 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.58□□□□□ -0.08
VSX2P58304 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.58□□□□□ -0.08
VSX2P58304 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.58□□□□□ -0.08
VSX2P58304 AC007551.1-201ENST00000457394 519 ntBASIC14.58□□□□□ -0.08
VSX2P58304 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.58□□□□□ -0.08
VSX2P58304 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.58□□□□□ -0.08
VSX2P58304 AC145423.3-201ENST00000615987 467 ntBASIC14.58□□□□□ -0.08
VSX2P58304 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.58□□□□□ -0.08
VSX2P58304 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VSX2P58304 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms