Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.31■□□□□ 0.68
BRPF1P55201 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
BRPF1P55201 POM121L8P-201ENST00000417732 1281 ntBASIC19.31■□□□□ 0.68
BRPF1P55201 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.31■□□□□ 0.68
BRPF1P55201 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 POM121L9P-203ENST00000441984 1285 ntBASIC19.31■□□□□ 0.68
BRPF1P55201 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.31■□□□□ 0.68
BRPF1P55201 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 TDH-203ENST00000531764 1110 ntBASIC19.31■□□□□ 0.68
BRPF1P55201 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 RPS24-214ENST00000613865 538 ntTSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 AC145423.3-201ENST00000615987 467 ntBASIC19.31■□□□□ 0.68
BRPF1P55201 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BRPF1P55201 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BRPF1P55201 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BRPF1P55201 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
BRPF1P55201 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.3■□□□□ 0.68
BRPF1P55201 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 AC004466.1-201ENST00000599515 1080 ntBASIC19.3■□□□□ 0.68
BRPF1P55201 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 AC132938.4-201ENST00000623835 848 ntBASIC19.3■□□□□ 0.68
BRPF1P55201 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BRPF1P55201 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
BRPF1P55201 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BRPF1P55201 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BRPF1P55201 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 AC099063.4-201ENST00000641099 1602 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.29■□□□□ 0.68
BRPF1P55201 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 TLE1P1-201ENST00000422965 589 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 MESTP3-201ENST00000503460 968 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.29■□□□□ 0.68
BRPF1P55201 SLC25A47P1-201ENST00000531577 414 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.29■□□□□ 0.68
BRPF1P55201 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.29■□□□□ 0.68
BRPF1P55201 RHOQP1-201ENST00000555758 579 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 BTNL10-201ENST00000595971 695 ntBASIC19.29■□□□□ 0.68
BRPF1P55201 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BRPF1P55201 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.29■□□□□ 0.68
BRPF1P55201 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.29■□□□□ 0.68
BRPF1P55201 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms