Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD23BP54727 NUS1P3-201ENST00000423502 862 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 NME2P1-201ENST00000426182 414 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
RAD23BP54727 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.29■□□□□ 0.2
RAD23BP54727 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAD23BP54727 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 AC132938.2-201ENST00000579188 680 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
RAD23BP54727 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD23BP54727 AC010319.3-201ENST00000597028 470 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD23BP54727 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 AL591163.1-201ENST00000641757 987 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD23BP54727 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 REXO1L5P-201ENST00000622260 2098 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 AC026748.1-201ENST00000624349 3251 ntBASIC16.29■□□□□ 0.2
RAD23BP54727 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
RAD23BP54727 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RAD23BP54727 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
RAD23BP54727 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAD23BP54727 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 CU639417.3-201ENST00000624240 1404 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 MSTO2P-201ENST00000314835 1709 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 ACTG1P3-201ENST00000431775 1114 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 AC011495.1-201ENST00000498085 584 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 AC005225.4-201ENST00000557330 545 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.28■□□□□ 0.2
RAD23BP54727 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 AP005019.2-201ENST00000615104 511 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 IGHV3-72-202ENST00000621503 303 ntBASIC16.28■□□□□ 0.2
RAD23BP54727 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAD23BP54727 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAD23BP54727 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
RAD23BP54727 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.27■□□□□ 0.2
RAD23BP54727 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RAD23BP54727 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAD23BP54727 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms