Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATXN3P54252 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.66■□□□□ 0.1
ATXN3P54252 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.66■□□□□ 0.1
ATXN3P54252 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ATXN3P54252 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.66■□□□□ 0.1
ATXN3P54252 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 AC097376.2-205ENST00000610159 5334 ntBASIC15.65■□□□□ 0.1
ATXN3P54252 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.65■□□□□ 0.1
ATXN3P54252 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 AC006486.2-201ENST00000624246 2199 ntBASIC15.65■□□□□ 0.1
ATXN3P54252 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ATXN3P54252 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.65■□□□□ 0.1
ATXN3P54252 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.65■□□□□ 0.1
ATXN3P54252 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 POU5F1P6-201ENST00000466990 990 ntBASIC15.65■□□□□ 0.1
ATXN3P54252 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.65■□□□□ 0.1
ATXN3P54252 AC108725.1-201ENST00000495472 409 ntBASIC15.65■□□□□ 0.1
ATXN3P54252 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.65■□□□□ 0.1
ATXN3P54252 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.65■□□□□ 0.1
ATXN3P54252 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.65■□□□□ 0.1
ATXN3P54252 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ATXN3P54252 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.64■□□□□ 0.1
ATXN3P54252 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.64■□□□□ 0.09
ATXN3P54252 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.64■□□□□ 0.09
ATXN3P54252 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 LINC01144-201ENST00000626198 1710 ntBASIC15.64■□□□□ 0.09
ATXN3P54252 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ATXN3P54252 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.64■□□□□ 0.09
ATXN3P54252 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ATXN3P54252 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ATXN3P54252 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.63■□□□□ 0.09
ATXN3P54252 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ATXN3P54252 INTS4P2-202ENST00000614726 2019 ntBASIC15.63■□□□□ 0.09
ATXN3P54252 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ATXN3P54252 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms