Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ABCD3P28288 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 AC022616.1-201ENST00000518688 554 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 AC106886.1-201ENST00000568660 600 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.03□□□□□ -0.16
ABCD3P28288 AC239800.4-201ENST00000603712 296 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ABCD3P28288 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.03□□□□□ -0.16
ABCD3P28288 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.03□□□□□ -0.16
ABCD3P28288 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ABCD3P28288 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
ABCD3P28288 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.02□□□□□ -0.16
ABCD3P28288 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
ABCD3P28288 AL137783.1-201ENST00000623494 1896 ntBASIC14.02□□□□□ -0.16
ABCD3P28288 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
ABCD3P28288 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.02□□□□□ -0.16
ABCD3P28288 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ABCD3P28288 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.02□□□□□ -0.16
ABCD3P28288 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ABCD3P28288 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.02□□□□□ -0.17
ABCD3P28288 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ABCD3P28288 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ABCD3P28288 KRT43P-201ENST00000434019 910 ntBASIC14.02□□□□□ -0.17
ABCD3P28288 U91328.1-201ENST00000437528 223 ntBASIC14.02□□□□□ -0.17
ABCD3P28288 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.02□□□□□ -0.17
ABCD3P28288 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCD3P28288 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.02□□□□□ -0.17
ABCD3P28288 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.02□□□□□ -0.17
ABCD3P28288 AC145423.3-201ENST00000615987 467 ntBASIC14.02□□□□□ -0.17
ABCD3P28288 AL162274.1-201ENST00000617191 1098 ntBASIC14.02□□□□□ -0.17
ABCD3P28288 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCD3P28288 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ABCD3P28288 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ABCD3P28288 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.02□□□□□ -0.17
ABCD3P28288 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms