Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 ACKR1-201ENST00000368121 1240 ntBASIC18.29■□□□□ 0.52
CHMLP26374 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 DGCR5-201ENST00000399539 862 ntBASIC18.29■□□□□ 0.52
CHMLP26374 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CHMLP26374 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMLP26374 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMLP26374 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMLP26374 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMLP26374 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 RPSAP52-203ENST00000622976 1023 ntBASIC18.29■□□□□ 0.52
CHMLP26374 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CHMLP26374 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMLP26374 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CHMLP26374 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMLP26374 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 AC055811.4-201ENST00000624039 1754 ntBASIC18.28■□□□□ 0.52
CHMLP26374 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMLP26374 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.28■□□□□ 0.52
CHMLP26374 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMLP26374 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMLP26374 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.28■□□□□ 0.52
CHMLP26374 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMLP26374 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMLP26374 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMLP26374 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMLP26374 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMLP26374 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMLP26374 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMLP26374 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.27■□□□□ 0.52
CHMLP26374 AC093433.1-201ENST00000458048 571 ntBASIC18.27■□□□□ 0.52
CHMLP26374 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 GIMAP3P-201ENST00000495150 836 ntBASIC18.27■□□□□ 0.52
CHMLP26374 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMLP26374 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CHMLP26374 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMLP26374 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMLP26374 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.27■□□□□ 0.52
CHMLP26374 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.27■□□□□ 0.52
CHMLP26374 CU634019.7-201ENST00000624153 1185 ntBASIC18.27■□□□□ 0.52
CHMLP26374 FP236241.2-201ENST00000624906 1185 ntBASIC18.27■□□□□ 0.52
CHMLP26374 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMLP26374 INTS4P1-203ENST00000641008 3683 ntBASIC18.27■□□□□ 0.52
CHMLP26374 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.27■□□□□ 0.52
CHMLP26374 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CHMLP26374 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.27■□□□□ 0.51
CHMLP26374 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.27■□□□□ 0.51
CHMLP26374 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHMLP26374 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
CHMLP26374 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CHMLP26374 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms