Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 NAT9-211ENST00000580632 799 ntTSL 3 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 MIR4754-201ENST00000582477 89 ntBASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AL008718.2-201ENST00000609206 1313 ntBASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AL359258.3-201ENST00000622910 2331 ntBASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 AC244394.1-201ENST00000435000 1665 ntBASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSB-PGBD3P0DP91 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 AC012441.2-201ENST00000444843 739 ntBASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 RN7SL181P-201ENST00000462921 277 ntBASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 AC132192.2-201ENST00000596206 1147 ntBASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 AL805961.1-201ENST00000642026 753 ntBASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 AC006449.5-201ENST00000610658 2098 ntBASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CSB-PGBD3P0DP91 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 SCARNA21-201ENST00000517026 139 ntBASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.95■□□□□ 0.78
CSB-PGBD3P0DP91 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CSB-PGBD3P0DP91 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms