Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RB1P06400 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.93■□□□□ 0.14
RB1P06400 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RB1P06400 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RB1P06400 AL138725.1-201ENST00000407347 1314 ntBASIC15.93■□□□□ 0.14
RB1P06400 AC074138.1-201ENST00000611182 1303 ntBASIC15.93■□□□□ 0.14
RB1P06400 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.92■□□□□ 0.14
RB1P06400 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 KRT8P21-201ENST00000430398 1491 ntBASIC15.92■□□□□ 0.14
RB1P06400 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.92■□□□□ 0.14
RB1P06400 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RB1P06400 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 RN7SKP230-201ENST00000365642 335 ntBASIC15.92■□□□□ 0.14
RB1P06400 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.92■□□□□ 0.14
RB1P06400 AC008723.1-201ENST00000506922 207 ntBASIC15.92■□□□□ 0.14
RB1P06400 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.92■□□□□ 0.14
RB1P06400 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 AL157414.3-201ENST00000624276 1954 ntBASIC15.92■□□□□ 0.14
RB1P06400 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.92■□□□□ 0.14
RB1P06400 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
RB1P06400 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.92■□□□□ 0.14
RB1P06400 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 AC079328.2-201ENST00000561241 3354 ntBASIC15.92■□□□□ 0.14
RB1P06400 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RB1P06400 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RB1P06400 AC092364.2-201ENST00000596710 2692 ntBASIC15.91■□□□□ 0.14
RB1P06400 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RB1P06400 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RB1P06400 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.91■□□□□ 0.14
RB1P06400 RPS9P1-201ENST00000419943 583 ntBASIC15.91■□□□□ 0.14
RB1P06400 AL592076.1-201ENST00000424448 303 ntBASIC15.91■□□□□ 0.14
RB1P06400 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.91■□□□□ 0.14
RB1P06400 RN7SL67P-201ENST00000492147 296 ntBASIC15.91■□□□□ 0.14
RB1P06400 ALG3P1-201ENST00000508806 1114 ntBASIC15.91■□□□□ 0.14
RB1P06400 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.91■□□□□ 0.14
RB1P06400 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.91■□□□□ 0.14
RB1P06400 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.91■□□□□ 0.14
RB1P06400 AP001065.2-201ENST00000617205 644 ntBASIC15.91■□□□□ 0.14
RB1P06400 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 AC006449.5-201ENST00000610658 2098 ntBASIC15.91■□□□□ 0.14
RB1P06400 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.91■□□□□ 0.14
RB1P06400 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.91■□□□□ 0.14
RB1P06400 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RB1P06400 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms