Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 AL596257.1-201ENST00000641463 2694 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 AC134407.2-201ENST00000625089 1978 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.83□□□□□ -0.36
ABCA1O95477 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 AC079178.1-201ENST00000420915 656 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 POM121L10P-201ENST00000436994 1285 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.83□□□□□ -0.36
ABCA1O95477 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.83□□□□□ -0.36
ABCA1O95477 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.83□□□□□ -0.36
ABCA1O95477 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.83□□□□□ -0.36
ABCA1O95477 AC015910.1-201ENST00000579400 975 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
ABCA1O95477 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.83□□□□□ -0.36
ABCA1O95477 AL096828.3-201ENST00000615354 462 ntBASIC12.83□□□□□ -0.36
ABCA1O95477 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ABCA1O95477 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ABCA1O95477 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.83□□□□□ -0.36
ABCA1O95477 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ABCA1O95477 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
ABCA1O95477 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 LDHBP1-201ENST00000455730 1119 ntBASIC12.82□□□□□ -0.36
ABCA1O95477 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 TMEM198B-204ENST00000484016 896 ntBASIC12.82□□□□□ -0.36
ABCA1O95477 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.82□□□□□ -0.36
ABCA1O95477 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 AL590640.2-201ENST00000457038 527 ntBASIC12.82□□□□□ -0.36
ABCA1O95477 HIST2H2BC-201ENST00000498492 580 ntBASIC12.82□□□□□ -0.36
ABCA1O95477 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.82□□□□□ -0.36
ABCA1O95477 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.82□□□□□ -0.36
ABCA1O95477 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ABCA1O95477 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.82□□□□□ -0.36
ABCA1O95477 AC018735.1-201ENST00000437208 1502 ntBASIC12.82□□□□□ -0.36
ABCA1O95477 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms