Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NDUFS3O75489 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.21■□□□□ 0.03
NDUFS3O75489 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NDUFS3O75489 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFS3O75489 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFS3O75489 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NDUFS3O75489 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFS3O75489 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NDUFS3O75489 AC087499.6-201ENST00000411576 835 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 AL353779.1-201ENST00000434793 351 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFS3O75489 FAM207CP-201ENST00000443486 507 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFS3O75489 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFS3O75489 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFS3O75489 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.21■□□□□ 0.03
NDUFS3O75489 AL132655.2-201ENST00000596276 594 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.21■□□□□ 0.03
NDUFS3O75489 AL096865.1-201ENST00000606796 927 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 MIR8072-201ENST00000614241 80 ntBASIC15.21■□□□□ 0.03
NDUFS3O75489 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.21■□□□□ 0.03
NDUFS3O75489 AL391825.1-201ENST00000457671 1364 ntBASIC15.21■□□□□ 0.02
NDUFS3O75489 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFS3O75489 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.21■□□□□ 0.02
NDUFS3O75489 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
NDUFS3O75489 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFS3O75489 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
NDUFS3O75489 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFS3O75489 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NDUFS3O75489 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.21■□□□□ 0.02
NDUFS3O75489 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
NDUFS3O75489 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFS3O75489 BCRP1-201ENST00000444246 691 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC123567.1-201ENST00000548294 1261 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFS3O75489 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC120045.2-201ENST00000567334 178 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.2■□□□□ 0.02
NDUFS3O75489 LINC02560-201ENST00000596379 459 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 INTS4P2-202ENST00000614726 2019 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 LILRP1-201ENST00000444199 1370 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC099063.4-201ENST00000641099 1602 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.2■□□□□ 0.02
NDUFS3O75489 AC106881.1-201ENST00000605849 3329 ntBASIC15.2■□□□□ 0.02
NDUFS3O75489 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NDUFS3O75489 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.2■□□□□ 0.02
NDUFS3O75489 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC093525.8-201ENST00000624099 1342 ntBASIC15.19■□□□□ 0.02
NDUFS3O75489 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms