Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 RPL13P2-201ENST00000440687 659 ntBASIC13.58□□□□□ -0.24
ZNF254O75437 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 AC112482.1-201ENST00000492080 688 ntBASIC13.58□□□□□ -0.24
ZNF254O75437 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF254O75437 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF254O75437 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ZNF254O75437 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF254O75437 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF254O75437 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF254O75437 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF254O75437 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF254O75437 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF254O75437 AC041040.2-201ENST00000622926 2899 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 AC087386.2-201ENST00000623212 4637 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 AC211486.1-202ENST00000416371 468 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 AC254562.1-201ENST00000417586 456 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 UPF3AP3-201ENST00000420996 769 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF254O75437 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF254O75437 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 HLA-V-204ENST00000476601 1289 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 AC211476.1-201ENST00000503899 468 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.57□□□□□ -0.24
ZNF254O75437 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF254O75437 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 AC025181.2-201ENST00000606994 802 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ZNF254O75437 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF254O75437 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF254O75437 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF254O75437 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 AC138969.2-201ENST00000532739 9932 ntBASIC13.57□□□□□ -0.24
ZNF254O75437 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.56□□□□□ -0.24
ZNF254O75437 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF254O75437 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ZNF254O75437 AC138969.3-201ENST00000546612 1459 ntBASIC13.56□□□□□ -0.24
ZNF254O75437 AC138932.2-201ENST00000548268 1459 ntBASIC13.56□□□□□ -0.24
ZNF254O75437 AC126755.4-201ENST00000549796 1459 ntBASIC13.56□□□□□ -0.24
ZNF254O75437 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF254O75437 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
ZNF254O75437 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
ZNF254O75437 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZNF254O75437 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF254O75437 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms