Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ACTBP11-201ENST00000436287 1126 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 YBX1P6-201ENST00000442962 1002 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GAPDHP40-201ENST00000505218 1006 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 RNA5SP412-201ENST00000516234 123 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 KRT90P-201ENST00000549264 1064 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC010328.2-201ENST00000597698 1111 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC025181.2-201ENST00000606994 802 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 RHOXF1P1-202ENST00000635473 501 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 AC067750.1-201ENST00000608826 6545 ntBASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPA3F8WFD2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PPT1-215ENST00000641471 2368 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AC026954.1-201ENST00000429771 1293 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AL355994.2-201ENST00000447882 704 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 GNRHR2-203ENST00000581100 1187 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 KRT8P35-201ENST00000483942 1338 ntBASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NPIPA3F8WFD2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NPIPA3F8WFD2 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms