Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AF228730.6-201ENST00000641497 218 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC084121.3-201ENST00000641716 218 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC018442.1-201ENST00000421439 2061 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL121723.1-201ENST00000445194 1519 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC105206.1-202ENST00000314927 2368 ntBASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.77□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 RPL37AP1-201ENST00000412502 279 ntBASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC015818.8-201ENST00000587907 1519 ntBASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AC007787.1-201ENST00000588095 1583 ntBASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 AL122018.1-201ENST00000446607 2310 ntBASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TRBV6-7A0A0A0MS04 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TRBV6-7A0A0A0MS04 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms