Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 LINC01230-201ENST00000625222 3017 ntBASIC17.36■□□□□ 0.37
CLIC4Q9Y696 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLIC4Q9Y696 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PMS2P2-201ENST00000425039 1128 ntBASIC17.35■□□□□ 0.37
CLIC4Q9Y696 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 GPALPP1-207ENST00000611650 899 ntBASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLIC4Q9Y696 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms