Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ABCA3Q99758 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ABCA3Q99758 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC19.53■□□□□ 0.72
ABCA3Q99758 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 RN7SL494P-201ENST00000461517 304 ntBASIC19.53■□□□□ 0.72
ABCA3Q99758 AC095040.1-201ENST00000513286 675 ntBASIC19.53■□□□□ 0.72
ABCA3Q99758 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC19.53■□□□□ 0.72
ABCA3Q99758 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC19.53■□□□□ 0.72
ABCA3Q99758 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
ABCA3Q99758 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
ABCA3Q99758 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ABCA3Q99758 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 AL139384.1-201ENST00000612143 3047 ntBASIC19.52■□□□□ 0.72
ABCA3Q99758 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.52■□□□□ 0.72
ABCA3Q99758 PCDHA14-201ENST00000506751 2298 ntBASIC19.52■□□□□ 0.72
ABCA3Q99758 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ABCA3Q99758 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.52■□□□□ 0.72
ABCA3Q99758 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.52■□□□□ 0.72
ABCA3Q99758 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.52■□□□□ 0.72
ABCA3Q99758 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.52■□□□□ 0.72
ABCA3Q99758 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC19.52■□□□□ 0.72
ABCA3Q99758 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AC013553.1-201ENST00000560906 267 ntBASIC19.52■□□□□ 0.72
ABCA3Q99758 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.52■□□□□ 0.72
ABCA3Q99758 AL627230.2-201ENST00000613254 655 ntBASIC19.52■□□□□ 0.72
ABCA3Q99758 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ABCA3Q99758 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ABCA3Q99758 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ABCA3Q99758 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.52■□□□□ 0.71
ABCA3Q99758 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ABCA3Q99758 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ABCA3Q99758 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 GEMIN8P4-201ENST00000380526 729 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 PPP1R2P4-201ENST00000424051 595 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 RN7SL23P-201ENST00000484055 275 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 RN7SL530P-201ENST00000485097 298 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 KRT8P2-201ENST00000556193 944 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ABCA3Q99758 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCA3Q99758 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCA3Q99758 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 MROH4P-201ENST00000431302 1578 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 AC112693.3-201ENST00000624819 1983 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 BRD7P5-201ENST00000299197 1822 ntBASIC19.51■□□□□ 0.71
ABCA3Q99758 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCA3Q99758 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ABCA3Q99758 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCA3Q99758 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ABCA3Q99758 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ABCA3Q99758 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCA3Q99758 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms