Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 DUX4L46-201ENST00000566845 751 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AC009560.1-201ENST00000620208 434 ntBASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.68□□□□□ -0.38
CSMD1Q96PZ7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC055811.3-201ENST00000584952 686 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AL008718.2-201ENST00000609206 1313 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 KRT17P5-201ENST00000332088 839 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 TSPY25P-201ENST00000429463 745 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC106047.2-201ENST00000511723 743 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC018846.1-201ENST00000568231 183 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 HMGB1P24-201ENST00000611897 328 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 SHC1P1-201ENST00000425230 1745 ntBASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSMD1Q96PZ7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 BCAS2P2-201ENST00000425064 674 ntBASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AC092638.2-201ENST00000441105 947 ntBASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AC108724.1-201ENST00000481669 352 ntBASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AC011471.3-201ENST00000623576 402 ntBASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 MIR4313-201ENST00000580760 101 ntBASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSMD1Q96PZ7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms