Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
IFT43Q96FT9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IFT43Q96FT9 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 MYCLP2-201ENST00000449268 967 ntBASIC15.77■□□□□ 0.12
IFT43Q96FT9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 AL162274.1-201ENST00000617191 1098 ntBASIC15.77■□□□□ 0.12
IFT43Q96FT9 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IFT43Q96FT9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
IFT43Q96FT9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
IFT43Q96FT9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
IFT43Q96FT9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC112693.3-201ENST00000624819 1983 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ARSEP1-201ENST00000420443 635 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ATP5G2P4-201ENST00000442175 420 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC123567.1-201ENST00000548294 1261 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 RARRES2P5-201ENST00000564013 466 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms