Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 RBM38-204ENST00000371219 760 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 AC022616.1-201ENST00000518688 554 ntBASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 ELOB-205ENST00000572954 331 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 LINC00244-201ENST00000625073 613 ntBASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC5.91□□□□□ -1.46
SYNE2Q8WXH0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MESTP3-201ENST00000503460 968 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 RNA5SP406-201ENST00000516106 112 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC099343.2-201ENST00000605082 686 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AL136084.3-201ENST00000605631 439 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 COG6-212ENST00000630730 186 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AL137783.1-201ENST00000623494 1896 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC022483.2-201ENST00000461464 555 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC004066.1-201ENST00000502488 802 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MIR7704-201ENST00000610524 59 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 PCGF3-213ENST00000620529 1899 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 IGHV1-12-201ENST00000518307 205 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC239859.4-201ENST00000582255 675 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MIR378I-201ENST00000582688 76 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 AC005052.1-201ENST00000625181 2492 ntBASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SYNE2Q8WXH0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 FTLP3-201ENST00000427242 528 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC103724.2-201ENST00000520355 476 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC005154.1-217ENST00000584199 581 ntTSL 4 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AL022334.2-201ENST00000610000 484 ntBASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC5.9□□□□□ -1.47
SYNE2Q8WXH0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms